BioBayesNet - Feature Extraction and Bayesian Network Modeling of Biological Sequences

Learning a Bayesian Network with BioBayesNet

There are two ways to learn a network structure on the available data:

If you have only biological sequences, click here.
You have to upload sequences in FASTA format. The header should contain a sequence name, the class label and optionally the location of a specific subsequence (e.g. a binding site). After uploading you are directed to an input form where you can select a number of features which should be generated from the input sequences.

If you have your own feature vectors, click here.
You have to upload two files in C4.5 format:
- a file containing the class labels and feature names with ranges and
- a file with the input data points.
This option gives you the full flexibility but it requires to generate your own features in advance.